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CRE ID : FCMM_118271
CRE Name : cp1@Mir1897,cp9@Sox2ot
Annotations
Bound TFs (ChIP-Atlas)
Expression
Download Annotation JSON
Genomic Position
chr3 : 34637700 .. 34638534
Organism
Mouse (GRCm38/mm10)
Promoter/TSS Annotation
Nearest transcript IDs
ENSMUST00000197103.1, ENSMUST00000199171.4, ENSMUST00000200092.1, ENSMUST00000198006.1, ENSMUST00000197258.1, NR_035433.1, AK031919, AK039272
Nearest transcript distance
0
Promoter GeneID
100316679
,
320478
Promoter HGNC ID/MGI ID
MGI:2444112
,
MGI:3811407
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding), microRNA 1897
Promoter Gene Symbols
Mir1897, Sox2ot
Promoter Gene Synonyms
B230215L15Rik, Mirn1897, mmu-mir-1897
Overlapped FANTOM5 CAGE Peaks
id:
mm9::chr3:34537138..34537150,+;mm_23022.1
name:
p3@Sox2ot
id:
mm9::chr3:34537243..34537264,+;mm_23023.1
name:
p2@Sox2ot
id:
mm9::chr3:34537266..34537293,+;mm_23024.1
name:
mm_23024.1
Overlapped refTSS TSSs
rfmm_25430.1
rfmm_25431.1
rfmm_25432.1
Enhancer Annotation
Overlapped FANTOM5 Enhancers
CRE Annotation
Overlapped SCREEN cCREs
id:
EM10E0727030
type:
pELS
id:
EM10E0727031
type:
PLS
id:
EM10E1107797
type:
PLS
Overlapped SilencerDB Silencers
MS_01327003
(Embryonic stem cell)
Overlapped VISTA Enhancers
External Links
MoG+
UCSC Genome Browser