CRE ID : FCMM_118265

CRE Name : cp10@Sox2ot

Genomic Position
chr3 : 34559845 .. 34560418
Organism
Mouse (GRCm38/mm10)

Promoter/TSS Annotation

Nearest transcript IDs
ENSMUST00000200414.4, ENSMUST00000197977.4, ENSMUST00000198170.4, ENSMUST00000196795.1, NR_015580.2, BC057611
Nearest transcript distance
0
Promoter GeneID
320478
Promoter HGNC ID/MGI ID
MGI:2444112
Promoter UniProt ID
Promoter Gene Names
SOX2 overlapping transcript (non-protein coding)
Promoter Gene Symbols
Sox2ot
Promoter Gene Synonyms
B230215L15Rik
Overlapped FANTOM5 CAGE Peaks
id: mm9::chr3:34459116..34459125,+;mm_23013.1
name: p12@Sox2ot
id: mm9::chr3:34459134..34459146,+;mm_23014.1
name: p6@Sox2ot
id: mm9::chr3:34459266..34459272,+;mm_23015.1
name: p3@Gm27403
id: mm9::chr3:34459282..34459308,+;mm_23016.1
name: p1@Sox2ot

Enhancer Annotation

Overlapped FANTOM5 Enhancers

CRE Annotation

Overlapped SCREEN cCREs
id: EM10E0727018
type: PLS
id: EM10E0727019
type: PLS
Overlapped SilencerDB Silencers
Overlapped VISTA Enhancers

External Links

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Fanta.bio is a collection of functional genome annotations with transcriptional activities. This database is supported by JST NBDC Grant Number JPMJND2202

Fanta.bio website is licensed under a Creative Commons Attribution 4.0 International License.
CRE data version: v1.2.0 , Website version: v2.0.29-beta.1